• Private Fitness
  • Home
  • Find Gene
  • BLAST
  • Experiments
  • Organisms
  • Help
  • Gene
  • Fitness
  • Nearby
  • Cofit
  • Protein
  • Homologs
  • Top cofit genes for GFF3958 from Variovorax sp. SCN45

    Pterin-4-alpha-carbinolamine dehydratase (EC 4.2.1.96)
    SEED: Pterin-4-alpha-carbinolamine dehydratase (EC 4.2.1.96)
    KEGG: 4a-hydroxytetrahydrobiopterin dehydratase

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF17 hypothetical protein no 0.59
    2 GFF3978 ABC-type branched-chain amino acid transport systems, periplasmic component no 0.59
    3 GFF3374 no description no 0.59
    4 GFF6995 Flagellar M-ring protein FliF no 0.57
    5 GFF3885 tRNA pseudouridine(38-40) synthase (EC 5.4.99.12) 0.49 0.57
    6 GFF624 hypothetical protein no 0.56
    7 GFF2173 no description no 0.55
    8 GFF2868 Glyoxylate reductase (EC 1.1.1.79) / Glyoxylate reductase (EC 1.1.1.26) / Hydroxypyruvate reductase (EC 1.1.1.81); 2-ketoaldonate reductase, broad specificity (EC 1.1.1.215) no 0.55
    9 GFF373 Probable transmembrane protein no 0.55
    10 GFF5016 ATP-dependent RNA helicase RhlE (EC 3.6.4.13) no 0.55
    11 GFF5071 AmpG permease no 0.54
    12 GFF6221 T6SS associated component TagF (ImpM) 0.26 0.54
    13 GFF3633 hypothetical protein no 0.53
    14 GFF7160 hypothetical protein no 0.53
    15 GFF5955 Transcriptional regulator, LysR family no 0.53
    16 GFF3587 KEGG: putative spermidine/putrescine transport system ATP-binding protein no 0.53
    17 GFF3812 Bis-ABC ATPase Uup 0.55 0.52
    18 GFF2517 Adenosine (5')-pentaphospho-(5'')-adenosine pyrophosphohydrolase no 0.52
    19 GFF4188 Signal peptidase I (EC 3.4.21.89) no 0.52
    20 GFF1346 hypothetical protein 0.31 0.52

    Or look for negative cofitness