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  • Top cofit genes for PS417_20265 from Pseudomonas simiae WCS417

    transcriptional regulator
    SEED: Transcriptional regulators

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_05545 amino acid ABC transporter ATP-binding protein no 0.18
    2 PS417_18395 D-ribose ABC transporter, permease component RbsC (from data) no 0.17
    3 PS417_08505 membrane protein no 0.16
    4 PS417_17340 GNAT family acetyltransferase no 0.16
    5 PS417_11705 cyclic peptide transporter 0.55 0.15
    6 PS417_15305 type VI secretion protein 0.29 0.15
    7 PS417_10160 hypothetical protein 0.57 0.15
    8 PS417_15930 thioredoxin reductase no 0.15
    9 PS417_01005 methionine ABC transporter substrate-binding protein no 0.15
    10 PS417_20930 50S rRNA methyltransferase no 0.15
    11 PS417_20220 membrane protein no 0.15
    12 PS417_20500 hypothetical protein no 0.14
    13 PS417_04995 glutathione S-transferase no 0.14
    14 PS417_06885 dihydrodipicolinate synthase no 0.14
    15 PS417_02700 urease accessory protein UreG no 0.14
    16 PS417_14315 2,5-dioxovalerate dehydrogenase no 0.14
    17 PS417_09065 short-chain dehydrogenase no 0.14
    18 PS417_06140 cold-shock protein no 0.13
    19 PS417_04735 LysR family transcriptional regulator no 0.13
    20 PS417_10635 peptidylprolyl isomerase no 0.13

    Or look for negative cofitness