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Cofit
Protein
Homologs
Top cofit genes for GFF3956 from
Sphingobium sp. HT1-2
hypothetical protein
SEED: C-5 cytosine-specific DNA methylase
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF3720
Flagellar protein FlgJ [peptidoglycan hydrolase]
no
0.81
2
GFF3988
hypothetical protein
no
0.79
3
GFF413
Outer membrane protein A precursor
no
0.74
4
GFF3336
Aerobic cobaltochelatase CobT subunit (EC 6.6.1.2)
no
0.74
5
GFF3978
hypothetical protein
no
0.72
6
GFF1513
hypothetical protein
no
0.71
7
GFF818
Phosphoserine aminotransferase (EC 2.6.1.52)
no
0.70
8
GFF4307
Conjugative signal peptidase TrhF
no
0.69
9
GFF724
hypothetical protein
no
0.69
10
GFF2647
HPr kinase
no
0.69
11
GFF1240
dioxygenase, TauD/TfdA family
no
0.67
12
GFF1626
Tryptophan synthase beta chain (EC 4.2.1.20)
no
0.67
13
GFF3714
Flagellar basal-body rod protein FlgB
no
0.67
14
GFF1490
Threonine dehydratase, catabolic (EC 4.3.1.19) @ L-serine dehydratase, (PLP)-dependent (EC 4.3.1.17)
no
0.66
15
GFF2870
hypothetical protein
no
0.66
16
GFF1759
alpha-galactosidase (EC 3.2.1.22)
no
0.66
17
GFF4518
hypothetical protein
no
0.65
18
GFF954
Regulatory protein LuxR
no
0.65
19
GFF705
Proline iminopeptidase (EC 3.4.11.5)
no
0.65
20
GFF2924
hypothetical protein
no
0.65
Or look for
negative cofitness