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  • Top cofit genes for GFF3947 from Variovorax sp. SCN45

    Putative transmembrane protein
    SEED: Probable transmembrane protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF1336 ABC transporter, substrate-binding protein RSc1750 no 0.51
    2 GFF6126 putative membrane protein no 0.50
    3 GFF1815 Uricase (urate oxidase) (EC 1.7.3.3) 0.27 0.50
    4 GFF4081 Multicopper oxidase no 0.49
    5 GFF6137 TRAP dicarboxylate transporter, DctM subunit, unknown substrate 6 no 0.48
    6 GFF4742 ABC transporter, substrate-binding protein RSc1750 no 0.48
    7 GFF5403 no description no 0.48
    8 GFF2562 UPF0391 membrane protein RGE_28580 no 0.46
    9 GFF474 FIG00537682: hypothetical protein no 0.46
    10 GFF1794 hypothetical protein no 0.45
    11 GFF2170 Branched-chain amino acid ABC transporter, ATP-binding protein LivF (TC 3.A.1.4.1) no 0.45
    12 GFF1422 L-lactate dehydrogenase no 0.45
    13 GFF1175 Two-component system response regulator QseB no 0.45
    14 GFF1448 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) no 0.44
    15 GFF2064 Anhydro-N-acetylmuramic acid kinase (EC 2.7.1.170) no 0.44
    16 GFF6285 Probable signal peptide protein no 0.44
    17 GFF4262 hypothetical protein no 0.43
    18 GFF1373 Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63) no 0.43
    19 GFF3310 Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) no 0.42
    20 GFF4778 Broad-specificity amino acid ABC transporter, permease protein 1 no 0.42

    Or look for negative cofitness