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    • Top cofit genes for GFF3945 from Variovorax sp. SCN45

    Phosphate transport regulator (distant homolog of PhoU)
    SEED: Phosphate transport regulator (distant homolog of PhoU)
    KEGG: hypothetical protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF5410 Adenylate cyclase (EC 4.6.1.1) no 0.79
    2 GFF183 Virulence protein no 0.76
    3 GFF5487 Thymidine phosphorylase (EC 2.4.2.4) no 0.75
    4 GFF3923 Kynurenine formamidase, bacterial (EC 3.5.1.9) no 0.73
    5 GFF2682 Protein containing domains DUF403 no 0.69
    6 GFF5870 hypothetical protein no 0.69
    7 GFF5325 3-dehydroquinate synthase (EC 4.2.3.4) 0.61 0.68
    8 GFF3946 Probable low-affinity inorganic phosphate transporter 0.87 0.67
    9 GFF5261 Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49) no 0.67
    10 GFF5868 hypothetical protein no 0.66
    11 GFF3582 Tripartite tricarboxylate transporter TctC family no 0.65
    12 GFF255 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase (EC 2.3.1.117) no 0.65
    13 GFF5064 Exonuclease SbcC no 0.65
    14 GFF5871 hypothetical protein no 0.65
    15 GFF3307 FIG01161751: hypothetical protein 0.55 0.65
    16 GFF452 Chloride channel protein no 0.65
    17 GFF6638 no description no 0.64
    18 GFF6042 Fatty acid desaturase (EC 1.14.19.1); Delta-9 fatty acid desaturase (EC 1.14.19.1) no 0.64
    19 GFF305 uncharacterized domain / RidA/YER057c/UK114 superfamily, group 5 no 0.63
    20 GFF5307 Lipid A biosynthesis lauroyl acyltransferase (EC 2.3.1.241) 0.50 0.63

    Or look for negative cofitness