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Cofit
Protein
Homologs
Top cofit genes for GFF3940 from
Variovorax sp. SCN45
putative membrane protein
SEED: membrane protein, putative
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF3227
no description
no
0.60
2
GFF1338
ABC transporter, permease protein 1 RSc1751
no
0.55
3
GFF4174
FIG00919961: hypothetical protein
no
0.55
4
GFF1422
L-lactate dehydrogenase
no
0.52
5
GFF6986
hypothetical protein
no
0.51
6
GFF1814
2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline (OHCU) decarboxylase (EC 4.1.1.97) / Allantoate amidohydrolase (EC 3.5.3.9)
no
0.50
7
GFF5507
Esterase/lipase/thioesterase family protein
no
0.49
8
GFF2488
Two-component transcriptional response regulator, LuxR family
no
0.48
9
GFF5479
hypothetical protein
no
0.47
10
GFF6482
Transcriptional regulator, AcrR family
no
0.47
11
GFF3514
no description
no
0.46
12
GFF3115
Methionine ABC transporter substrate-binding protein
no
0.46
13
GFF2096
Acyl-CoA dehydrogenase family protein
no
0.46
14
GFF1389
Paraquat-inducible protein B
no
0.46
15
GFF6223
T6SS outer membrane component TssL (ImpK/VasF) / OmpA/MotB domain
no
0.46
16
GFF181
Protein of unknown function (DUF1501)
no
0.46
17
GFF5688
Transcriptional regulator, LysR family
no
0.46
18
GFF6675
ortholog of Bordetella pertussis (BX470248) BP3300
no
0.45
19
GFF6682
Efflux ABC transporter, permease protein
no
0.45
20
GFF3462
Urea ABC transporter, permease protein UrtC
no
0.44
Or look for
negative cofitness