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  • Top cofit genes for GFF3940 from Variovorax sp. SCN45

    putative membrane protein
    SEED: membrane protein, putative

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF3227 no description no 0.60
    2 GFF1338 ABC transporter, permease protein 1 RSc1751 no 0.55
    3 GFF4174 FIG00919961: hypothetical protein no 0.55
    4 GFF1422 L-lactate dehydrogenase no 0.52
    5 GFF6986 hypothetical protein no 0.51
    6 GFF1814 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline (OHCU) decarboxylase (EC 4.1.1.97) / Allantoate amidohydrolase (EC 3.5.3.9) no 0.50
    7 GFF5507 Esterase/lipase/thioesterase family protein no 0.49
    8 GFF2488 Two-component transcriptional response regulator, LuxR family no 0.48
    9 GFF5479 hypothetical protein no 0.47
    10 GFF6482 Transcriptional regulator, AcrR family no 0.47
    11 GFF3514 no description no 0.46
    12 GFF3115 Methionine ABC transporter substrate-binding protein no 0.46
    13 GFF2096 Acyl-CoA dehydrogenase family protein no 0.46
    14 GFF1389 Paraquat-inducible protein B no 0.46
    15 GFF6223 T6SS outer membrane component TssL (ImpK/VasF) / OmpA/MotB domain no 0.46
    16 GFF181 Protein of unknown function (DUF1501) no 0.46
    17 GFF5688 Transcriptional regulator, LysR family no 0.46
    18 GFF6675 ortholog of Bordetella pertussis (BX470248) BP3300 no 0.45
    19 GFF6682 Efflux ABC transporter, permease protein no 0.45
    20 GFF3462 Urea ABC transporter, permease protein UrtC no 0.44

    Or look for negative cofitness