Top cofit genes for GFF394 from Hydrogenophaga sp. GW460-11-11-14-LB1

transcriptional regulator, LuxR family
SEED: transcriptional regulator, LuxR family

Rank	Hit	Name	Description	Conserved?	Cofitness
1	GFF393		Sensor histidine kinase	no	0.85
2	GFF2732		Phytochrome, two-component sensor histidine kinase (EC 2.7.3.-)	no	0.81
3	GFF1438		Flagellar transcriptional activator FlhC	no	0.75
4	GFF1337		Type IV pilus biogenesis protein PilM	no	0.75
5	GFF1334		Type IV pilus biogenesis protein PilP	no	0.73
6	GFF1472		Regulatory protein, LuxR:Response regulator receiver	no	0.73
7	GFF596		Two-component sensor PilS	no	0.73
8	GFF1333		Type IV pilus biogenesis protein PilQ	no	0.72
9	GFF1335		Type IV pilus biogenesis protein PilO	no	0.71
10	GFF1270		FIG016425: Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains)	no	0.70
11	GFF2721		Twitching motility protein PilT	no	0.69
12	GFF1630		FolM Alternative dihydrofolate reductase 1	no	0.68
13	GFF1394		ABC transporter, fused ATPase and inner membrane subunits (EC 3.6.3.27)	no	0.68
14	GFF747		Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB	no	0.68
15	GFF1244		Endonuclease/exonuclease/phosphatase	no	0.67
16	GFF4213		FIG00932012: hypothetical protein	no	0.67
17	GFF1280		Type IV fimbrial assembly protein PilC	no	0.67
18	GFF1336		Type IV pilus biogenesis protein PilN	no	0.66
19	GFF546		Protein of unknown function DUF484	no	0.65
20	GFF5157		Type IV fimbrial biogenesis protein PilX	no	0.65

Or look for negative cofitness