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  • Top cofit genes for GFF3937 from Variovorax sp. SCN45

    Transcriptional regulator, AraC family

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF1828 phosphodiesterase I no 0.60
    2 GFF7100 similar to protocatechuate 4,5-dioxygenase beta chain no 0.55
    3 GFF4272 BUG/TctC family periplasmic protein no 0.53
    4 GFF3288 hypothetical protein no 0.51
    5 GFF4249 hypothetical protein no 0.51
    6 GFF1008 Glyoxalase family protein no 0.50
    7 GFF4544 RNA polymerase sigma factor RpoE no 0.50
    8 GFF1217 Transcriptional regulator RpiR in protein degradation cluster no 0.49
    9 GFF975 4-hydroxyphenylacetate 3-monooxygenase (EC 1.14.14.9) 0.19 0.49
    10 GFF6678 Putative inner membrane protein no 0.49
    11 GFF3504 BUG/TctC family periplasmic protein no 0.48
    12 GFF3533 Two-component system sensor histidine kinase no 0.47
    13 GFF3071 ADP-ribose pyrophosphatase of COG1058 family (EC 3.6.1.13) no 0.47
    14 GFF2954 6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44) no 0.47
    15 GFF1148 hypothetical protein no 0.47
    16 GFF6839 hypothetical protein no 0.46
    17 GFF267 no description no 0.46
    18 GFF6397 LysR family transcriptional regulator PA2758 no 0.46
    19 GFF494 RND efflux system, membrane fusion protein no 0.46
    20 GFF6389 Amidohydrolase domain protein no 0.46

    Or look for negative cofitness