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  • Top cofit genes for PS417_20155 from Pseudomonas simiae WCS417

    23S rRNA methyltransferase
    SEED: tRNA (Uracil54-C5-)-methyltransferase (EC 2.1.1.35)
    KEGG: RNA methyltransferase, TrmA family

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_06135 glycerol-3-phosphate acyltransferase no 0.31
    2 PS417_24500 DEAD/DEAH box helicase 0.20 0.30
    3 PS417_24230 ATP-dependent protease 0.45 0.29
    4 PS417_21125 phosphoadenosine phosphosulfate reductase 0.67 0.29
    5 PS417_24335 50S rRNA methyltransferase 0.70 0.28
    6 PS417_25105 hypothetical protein no 0.28
    7 PS417_01355 membrane protein no 0.27
    8 PS417_09800 cytosine deaminase no 0.27
    9 PS417_20930 50S rRNA methyltransferase 0.61 0.27
    10 PS417_05705 pyocin R2, holin 0.31 0.26
    11 PS417_25320 dTDP-4-dehydrorhamnose reductase 0.84 0.25
    12 PS417_23545 gamma-glutamyl kinase 0.69 0.25
    13 PS417_14835 amidase 0.58 0.25
    14 PS417_08225 acetolactate synthase no 0.24
    15 PS417_08205 acetyltransferase no 0.24
    16 PS417_23830 hypothetical protein 0.80 0.24
    17 PS417_20785 transcriptional regulator 0.76 0.23
    18 PS417_22050 ribonuclease BN 0.31 0.23
    19 PS417_08245 CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3- dehydrase reductase 0.74 0.23
    20 PS417_04860 ATPase 0.55 0.23

    Or look for negative cofitness