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  • Top cofit genes for GFF3935 from Variovorax sp. SCN45

    RNA polymerase ECF-type sigma factor
    SEED: RNA polymerase sigma-70 factor, ECF subfamily

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF3852 Tetrapyrrole methylase family protein 0.33 0.59
    2 GFF4857 benzoate MFS transporter BenK 0.31 0.58
    3 GFF2752 FIG00974677: hypothetical protein no 0.57
    4 GFF4874 Plasmid replication initiator protein no 0.56
    5 GFF563 Type IV fimbrial biogenesis protein PilY1 no 0.55
    6 GFF6173 Na(+) H(+) antiporter subunit A / Na(+) H(+) antiporter subunit B no 0.54
    7 GFF3906 Acyl-CoA dehydrogenase no 0.54
    8 GFF6537 hypothetical protein no 0.52
    9 GFF530 no description no 0.51
    10 GFF6392 hypothetical protein no 0.51
    11 GFF5026 Glutamate/aspartate ABC transporter, substrate-binding protein GltI (TC 3.A.1.3.4) no 0.51
    12 GFF3823 FIG00581576: hypothetical protein no 0.51
    13 GFF7146 Putative oxidoreductase in 4-hydroxyproline catabolic gene cluster no 0.50
    14 GFF564 hypothetical protein no 0.50
    15 GFF5021 Tripartite tricarboxylate transporter TctA family no 0.49
    16 GFF5291 Ferrichrome-iron receptor no 0.49
    17 GFF5492 Putative transmembrane lipoprotein no 0.49
    18 GFF6481 Bll1370 protein 0.30 0.49
    19 GFF1145 hypothetical protein no 0.48
    20 GFF492 no description no 0.48

    Or look for negative cofitness