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Cofit
Protein
Homologs
Top cofit genes for GFF3934 from
Variovorax sp. SCN45
PhnB protein
SEED: PhnB protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF5778
D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95)
no
0.61
2
GFF6442
Aldehyde dehydrogenase (EC 1.2.1.3)
no
0.58
3
GFF556
no description
no
0.57
4
GFF4414
Conjugative transfer protein TrbB
no
0.57
5
GFF7049
hypothetical protein
no
0.56
6
GFF7109
BUG/TctC family periplasmic protein
no
0.55
7
GFF2326
Transcriptional regulator, LysR family
no
0.54
8
GFF2136
Ribokinase (EC 2.7.1.15)
no
0.51
9
GFF3563
L-carnitine dehydratase/bile acid-inducible protein F
no
0.51
10
GFF1010
hypothetical protein
no
0.50
11
GFF2293
tRNA (cytidine(34)-2'-O)-methyltransferase (EC 2.1.1.207)
no
0.50
12
GFF4610
Long chain acyl-CoA dehydrogenase [fadN-fadA-fadE operon] (EC 1.3.8.8)
no
0.49
13
GFF1110
Recombination protein RecR
no
0.49
14
GFF1171
Transcriptional regulator, AraC family
no
0.48
15
GFF214
Putative transmembrane protein
no
0.48
16
GFF1646
Acyl-homoserine lactone acylase PvdQ (EC 3.5.1.-), quorum-quenching
no
0.48
17
GFF5452
no description
no
0.47
18
GFF4216
ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines)
no
0.47
19
GFF6902
Oxidoreductase, short-chain dehydrogenase/reductase family
no
0.47
20
GFF7270
Altronate dehydratase (EC 4.2.1.7)
no
0.47
Or look for
negative cofitness