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Cofit
Protein
Homologs
Top cofit genes for GFF3933 from
Sphingobium sp. HT1-2
hypothetical protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF1696
Excinuclease ABC subunit A
no
0.88
2
GFF441
Oxidoreductase, short-chain dehydrogenase/reductase family
no
0.87
3
GFF1829
Exoenzymes regulatory protein AepA precursor
no
0.87
4
GFF2839
Inner membrane transport permease YhhJ
no
0.85
5
GFF4546
hypothetical protein
no
0.85
6
GFF1935
hypothetical protein
no
0.81
7
GFF484
Predicted carboxypeptidase
no
0.81
8
GFF4959
UPF0301 protein YqgE
no
0.81
9
GFF3505
ABC transporter, fused permease protein
no
0.80
10
GFF2953
hypothetical protein
no
0.80
11
GFF5267
Transposase
no
0.80
12
GFF1423
Aromatic hydrocarbon utilization transcriptional regulator CatR (LysR family)
no
0.80
13
GFF942
hypothetical protein
no
0.79
14
GFF3944
General stress protein
no
0.79
15
GFF2156
hypothetical protein
no
0.79
16
GFF4425
LysR-family transcriptional regulator similar to hydrogen peroxide-inducible genes activator
no
0.79
17
GFF419
'23S rRNA (guanosine(2251)-2'-O)-methyltransferase (EC 2.1.1.185)' transl_table=11
0.28
0.78
18
GFF2607
hypothetical protein
no
0.78
19
GFF44
Acyl dehydratase
no
0.77
20
GFF3023
CzcABC family efflux RND transporter, transmembrane protein
no
0.76
Or look for
negative cofitness