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  • Top cofit genes for GFF3928 from Variovorax sp. SCN45

    Histone acetyltransferase HPA2 and related acetyltransferases
    SEED: Histone acetyltransferase HPA2 and related acetyltransferases

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF4656 TonB-dependent siderophore receptor no 0.51
    2 GFF6353 T6SS outer membrane component TssL (ImpK/VasF) / OmpA/MotB domain no 0.51
    3 GFF1349 Thioesterase no 0.49
    4 GFF613 hypothetical protein no 0.48
    5 GFF4723 ABC transporter, ATP-binding protein (cluster 1, maltose/g3p/polyamine/iron); ABC transporter, ATP-binding protein (cluster 10, nitrate/sulfonate/bicarbonate) no 0.46
    6 GFF1913 Short-chain dehydrogenase no 0.45
    7 GFF562 Type IV pilus biogenesis protein PilE no 0.44
    8 GFF994 Cytoskeleton protein RodZ no 0.44
    9 GFF2633 Proline iminopeptidase (EC 3.4.11.5) no 0.44
    10 GFF1907 Transcriptional regulator, AraC family no 0.44
    11 GFF1270 Cobalt-zinc-cadmium resistance protein CzcA; Cation efflux system protein CusA no 0.44
    12 GFF6385 Mll4878 protein no 0.44
    13 GFF5940 T6SS associated component TagJ (ImpE) no 0.44
    14 GFF1320 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) no 0.44
    15 GFF5948 hypothetical protein no 0.43
    16 GFF2531 Transcriptional regulator, AsnC family no 0.43
    17 GFF2384 no description no 0.43
    18 GFF5141 no description no 0.43
    19 GFF5806 RNA polymerase ECF-type sigma factor no 0.43
    20 GFF6830 penicillin amidase family protein no 0.43

    Or look for negative cofitness