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Cofit
Protein
Homologs
Top cofit genes for GFF3910 from
Variovorax sp. SCN45
MORN repeat family protein
SEED: MORN repeat family protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF5856
Outer membrane receptor proteins, likely involved in siderophore uptake
no
0.61
2
GFF5855
T1SS secreted agglutinin RTX
no
0.59
3
GFF3893
hypothetical protein
no
0.58
4
GFF5860
no description
no
0.57
5
GFF4415
Conjugative transfer protein TrbC
no
0.56
6
GFF1316
Cellulose synthase catalytic subunit [UDP-forming] (EC 2.4.1.12)
no
0.54
7
GFF4408
3-methylmercaptopropionyl-CoA ligase (EC 6.2.1.44) of DmdB2 type
no
0.53
8
GFF2830
Uncharacterized protein CC_3061
no
0.52
9
GFF2516
hypothetical protein
no
0.51
10
GFF3906
Acyl-CoA dehydrogenase
no
0.51
11
GFF3851
Uncharacterized MFS-type transporter
no
0.50
12
GFF6698
ClpXP protease specificity-enhancing factor SspB
no
0.50
13
GFF3836
Cyclic beta-1,2-glucan synthase (EC 2.4.1.-)
no
0.50
14
GFF3938
Intracellular protease
no
0.50
15
GFF4983
fumarate reductase/succinate dehydrogenase flavoprotein-like
no
0.49
16
GFF4863
Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
no
0.49
17
GFF5288
Uncharacterized protein PA4513
no
0.49
18
GFF6659
Multidrug efflux system MdtABC-TolC, inner-membrane proton/drug antiporter MdtB (RND type)
no
0.49
19
GFF312
FIG021862: membrane protein, exporter
no
0.48
20
GFF1313
Cellulose synthase operon protein C
no
0.48
Or look for
negative cofitness