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  • Top cofit genes for GFF3909 from Variovorax sp. SCN45

    Aconitate hydratase (EC 4.2.1.3)
    SEED: aconitate hydratase 1( EC:4.2.1.3 )
    KEGG: aconitate hydratase 1

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF3272 Inner membrane protein, KefB/KefC family 0.46 0.55
    2 GFF2574 Quinolinate phosphoribosyltransferase [decarboxylating] (EC 2.4.2.19) 0.62 0.55
    3 GFF3289 Putative phosphoesterase no 0.52
    4 GFF3450 Transcriptional regulator, LacI family no 0.51
    5 GFF244 Cys regulon transcriptional activator CysB no 0.51
    6 GFF5336 Phospholipid ABC transporter substrate-binding protein MlaD 0.94 0.51
    7 GFF976 no description no 0.50
    8 GFF6781 Para-aminobenzoate synthase, aminase component (EC 2.6.1.85) / Aminodeoxychorismate lyase (EC 4.1.3.38) no 0.50
    9 GFF2575 Quinolinate synthetase (EC 2.5.1.72) no 0.48
    10 GFF974 hypothetical protein no 0.47
    11 GFF2272 PhnB protein; putative DNA binding 3-demethylubiquinone-9 3-methyltransferase domain protein no 0.46
    12 GFF5310 Cytochrome c4 0.80 0.46
    13 GFF1177 Serine protease no 0.45
    14 GFF1205 Oxidoreductase probably involved in sulfite reduction no 0.45
    15 GFF4422 Conjugative transfer protein TrbG no 0.45
    16 GFF5339 Phospholipid ABC transporter-binding protein MlaB no 0.44
    17 GFF2580 L-aspartate oxidase (EC 1.4.3.16) 0.55 0.44
    18 GFF246 Transmembrane protein Msl3831 no 0.43
    19 GFF978 Propionate--CoA ligase (EC 6.2.1.17) no 0.43
    20 GFF4278 Putative short-chain dehydrogenase no 0.43

    Or look for negative cofitness