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  • Top cofit genes for GFF3906 from Variovorax sp. SCN45

    Acyl-CoA dehydrogenase
    SEED: Butyryl-CoA dehydrogenase (EC 1.3.99.2)
    KEGG: acyl-CoA dehydrogenase

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF3850 Periplasmic serine proteases (ClpP class) no 0.66
    2 GFF492 no description no 0.66
    3 GFF4801 DedA protein 0.50 0.64
    4 GFF5291 Ferrichrome-iron receptor no 0.63
    5 GFF5002 ABC-type branched-chain amino acid transport systems, periplasmic component no 0.63
    6 GFF5855 T1SS secreted agglutinin RTX no 0.62
    7 GFF5860 no description no 0.60
    8 GFF4406 Alkane-1 monooxygenase (EC 1.14.15.3) no 0.60
    9 GFF5856 Outer membrane receptor proteins, likely involved in siderophore uptake 0.23 0.59
    10 GFF7162 DNA helicase II related protein no 0.58
    11 GFF4857 benzoate MFS transporter BenK no 0.57
    12 GFF2516 hypothetical protein no 0.57
    13 GFF2830 Uncharacterized protein CC_3061 no 0.57
    14 GFF259 Bis-ABC ATPase YheS 0.37 0.56
    15 GFF456 Transcriptional regulator, AraC family no 0.56
    16 GFF4720 Putrescine transport system permease protein potI no 0.56
    17 GFF4399 hypothetical protein no 0.56
    18 GFF2817 Probable proline-rich protein no 0.55
    19 GFF3851 Uncharacterized MFS-type transporter no 0.55
    20 GFF6392 hypothetical protein no 0.55

    Or look for negative cofitness