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  • Top cofit genes for GFF3903 from Variovorax sp. SCN45

    Similar to citrate lyase beta chain, 10
    SEED: Citrate lyase beta chain (EC 4.1.3.6)
    KEGG: citrate lyase subunit beta / citryl-CoA lyase

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF6094 1,2-phenylacetyl-CoA epoxidase, subunit B (EC 1.14.13.149) no 0.57
    2 GFF1788 hypothetical protein no 0.57
    3 GFF247 ATP-dependent helicase HrpA 0.42 0.57
    4 GFF405 3-hydroxybutyrate dehydrogenase (EC 1.1.1.30) no 0.57
    5 GFF4632 Glycosyl transferase, family 2 no 0.55
    6 GFF3060 Dihydrodipicolinate synthase family no 0.55
    7 GFF1524 FIG006045: Sigma factor, ECF subfamily no 0.53
    8 GFF2603 Tripartite tricarboxylate transporter TctC family no 0.53
    9 GFF4334 Enoyl-CoA hydratase (EC 4.2.1.17) no 0.53
    10 GFF4877 no description no 0.52
    11 GFF4660 hypothetical protein no 0.51
    12 GFF4851 Coupling protein VirD4, ATPase required for T-DNA transfer no 0.51
    13 GFF6566 hypothetical protein no 0.51
    14 GFF5085 hypothetical protein no 0.51
    15 GFF5549 Hydrogen peroxide-inducible genes activator => OxyR 0.32 0.51
    16 GFF1028 FIG027190: Putative transmembrane protein no 0.50
    17 GFF2538 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) no 0.50
    18 GFF155 ABC transporter, substrate-binding protein (cluster 5, nickel/peptides/opines) no 0.49
    19 GFF1967 FAD linked oxidase-like no 0.49
    20 GFF1219 SAM-dependent methyltransferase no 0.49

    Or look for negative cofitness