Top cofit genes for GFF3900 from Variovorax sp. SCN45

Transcriptional regulator, GntR family
SEED: Putative alkanesulfonate metabolism utilization regulator
KEGG: GntR family transcriptional regulator

Rank Hit Name Description Conserved? Cofitness  
1 GFF364 acyl-CoA dehydrogenase, putative phosphotransferase no 0.58
2 GFF2306 Heme A synthase, cytochrome oxidase biogenesis protein Cox15-CtaA 0.71 0.57
3 GFF2011 hypothetical protein no 0.57
4 GFF2677 Aerobic glycerol-3-phosphate dehydrogenase (EC 1.1.5.3) no 0.56
5 GFF6723 Cysteine desulfurase (EC 2.8.1.7) no 0.54
6 GFF4610 Long chain acyl-CoA dehydrogenase [fadN-fadA-fadE operon] (EC 1.3.8.8) 0.40 0.53
7 GFF5267 Glucose-6-phosphate isomerase (EC 5.3.1.9) 0.31 0.52
8 GFF168 MCP methyltransferase, CheR-type no 0.52
9 GFF2304 Cytochrome oxidase biogenesis protein Surf1, facilitates heme A insertion 0.75 0.52
10 GFF3723 Cytochrome c5 no 0.51
11 GFF2300 Cytochrome oxidase biogenesis protein Cox11-CtaG, copper delivery to Cox1 0.74 0.50
12 GFF5158 Trehalose-6-phosphate phosphatase (EC 3.1.3.12) no 0.49
13 GFF291 Tol-Pal system peptidoglycan-associated lipoprotein PAL no 0.49
14 GFF3486 glutamine synthetase family protein no 0.48
15 GFF6776 Maltodextrin ABC transporter, permease protein MdxG no 0.48
16 GFF3265 Homoserine O-acetyltransferase (EC 2.3.1.31) 0.28 0.48
17 GFF2515 Glutamate 5-kinase (EC 2.7.2.11) / RNA-binding C-terminal domain PUA 0.56 0.47
18 GFF966 Probable two-component transmembrane sensor histidine kinase transcription regulator protein (EC 2.7.3.-) 0.65 0.47
19 GFF2302 Cytochrome c oxidase polypeptide III (EC 1.9.3.1) 0.70 0.47
20 GFF634 Urea ABC transporter, permease protein UrtC no 0.46

Or look for negative cofitness