Top cofit genes for GFF39 from Variovorax sp. SCN45

Transcriptional regulator, LysR family

Rank	Hit	Name	Description	Conserved?	Cofitness
1	GFF3385		Flavin-containing monooxygenase	no	0.56
2	GFF66		hypothetical protein	no	0.55
3	GFF2617		no description	no	0.54
4	GFF696		Glycosyl transferase, group 2 family	no	0.53
5	GFF6385		Mll4878 protein	no	0.52
6	GFF1630		Esterase/lipase	no	0.51
7	GFF6497		Protein of unknown function (DUF1501)	no	0.51
8	GFF756		no description	no	0.50
9	GFF7360		Urea ABC transporter, substrate-binding protein UrtA	no	0.49
10	GFF6341		no description	no	0.49
11	GFF672		Transcriptional regulator, LysR family	no	0.49
12	GFF5223		2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase (EC 2.3.1.117)	no	0.49
13	GFF313		FIG027190: Putative transmembrane protein	no	0.48
14	GFF6262		Transcriptional regulator PhnF	no	0.48
15	GFF7393		Mobile element protein	no	0.48
16	GFF4528		Permease of the drug/metabolite transporter (DMT) superfamily	no	0.48
17	GFF5636		Molybdenum ABC transporter, substrate-binding protein ModA	no	0.47
18	GFF7067		Oxidoreductase, short-chain dehydrogenase/reductase family	no	0.47
19	GFF1448		diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)	no	0.47
20	GFF1074		no description	no	0.46

Or look for negative cofitness