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    • Top cofit genes for GFF39 from Sphingobium sp. HT1-2

    Replication-associated recombination protein RarA
    SEED: FIG065221: Holliday junction DNA helicase
    KEGG: putative ATPase

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF2490 asparaginase/glutaminase no 0.87
    2 GFF2177 hypothetical protein no 0.84
    3 GFF3335 OsmC-like protein Pfl_1628 no 0.83
    4 GFF5082 Short-chain dehydrodenase (gene dltE) no 0.81
    5 GFF3503 two-component response regulator 0.28 0.81
    6 GFF1833 hypothetical protein no 0.80
    7 GFF4670 hypothetical protein no 0.80
    8 GFF4094 tRNA-Ile-GAT no 0.79
    9 GFF3742 hypothetical protein no 0.78
    10 GFF1284 Inner membrane protein, KefB/KefC family 0.39 0.78
    11 GFF1396 hypothetical protein no 0.77
    12 GFF4582 hypothetical protein no 0.77
    13 GFF2221 Proline dehydrogenase (EC 1.5.5.2) / Delta-1-pyrroline-5-carboxylate dehydrogenase (EC 1.2.1.88) 0.35 0.77
    14 GFF3880 Arylsulfatase (EC 3.1.6.1) no 0.77
    15 GFF1845 hypothetical protein no 0.77
    16 GFF4544 hypothetical protein no 0.76
    17 GFF1307 hypothetical protein no 0.76
    18 GFF3437 Transcriptional regulator, AraC family 0.51 0.76
    19 GFF2962 hypothetical protein no 0.76
    20 GFF2147 Branched-chain alpha-keto acid dehydrogenase, E1 component, beta subunit (EC 1.2.4.4) no 0.76

    Or look for negative cofitness