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  • Top cofit genes for GFF3898 from Sphingobium sp. HT1-2

    'tRNA (cytidine(32)/uridine(32)-2'-O)-methyltransferase (EC 2.1.1.200)' transl_table=11
    SEED: tRNA:Cm32/Um32 methyltransferase

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF1859 Precorrin-8X methylmutase (EC 5.4.99.61) no 0.79
    2 GFF3405 hypothetical protein no 0.78
    3 GFF5345 Type I restriction-modification system, specificity subunit S no 0.78
    4 GFF1858 Precorrin-2 C(20)-methyltransferase (EC 2.1.1.130) no 0.78
    5 GFF1887 50S ribosomal protein acetyltransferase no 0.77
    6 GFF4243 hypothetical protein no 0.77
    7 GFF4126 ABC transporter involved in resistance to organic solvents, substrate-binding protein 2 no 0.76
    8 GFF836 hypothetical protein no 0.76
    9 GFF5083 hypothetical protein no 0.72
    10 GFF2079 Enolase (EC 4.2.1.11) no 0.71
    11 GFF404 Aminodeoxychorismate lyase (EC 4.1.3.38) no 0.71
    12 GFF1463 Serine/threonine protein phosphatase (EC 3.1.3.16) no 0.71
    13 GFF1857 Precorrin-3B C(17)-methyltransferase (EC 2.1.1.131) no 0.71
    14 GFF1856 Precorrin-6A reductase (EC 1.3.1.54) no 0.71
    15 GFF3439 Phosphoribosylformylglycinamidine synthase, PurS subunit (EC 6.3.5.3) no 0.70
    16 GFF952 Gamma-glutamyl phosphate reductase (EC 1.2.1.41) no 0.70
    17 GFF1206 hypothetical protein no 0.70
    18 GFF2468 Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1) no 0.70
    19 GFF1424 Dihydroxy-acid dehydratase (EC 4.2.1.9) no 0.70
    20 GFF3795 Diaminopimelate decarboxylase (EC 4.1.1.20) no 0.69

    Or look for negative cofitness