Top cofit genes for GFF3888 from Variovorax sp. SCN45

3-isopropylmalate dehydrogenase (EC 1.1.1.85)
SEED: 3-isopropylmalate dehydrogenase (EC 1.1.1.85)
KEGG: 3-isopropylmalate dehydrogenase

Rank Hit Name Description Conserved? Cofitness  
1 GFF3890 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) 1.00 0.71
2 GFF5057 Peptidoglycan D,D-transpeptidase MrdA (EC 3.4.16.4) no 0.70
3 GFF3889 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) 0.99 0.70
4 GFF7295 HPr kinase/phosphorylase no 0.70
5 GFF5325 3-dehydroquinate synthase (EC 4.2.3.4) 0.96 0.64
6 GFF5605 D-xylose ABC transporter, ATP-binding protein XylG no 0.64
7 GFF6042 Fatty acid desaturase (EC 1.14.19.1); Delta-9 fatty acid desaturase (EC 1.14.19.1) no 0.64
8 GFF2611 Fructose ABC transporter, substrate-binding component FrcB no 0.63
9 GFF5603 D-xylose ABC transporter, substrate-binding protein XylF no 0.63
10 GFF5523 Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23) 0.84 0.62
11 GFF5145 hypothetical protein no 0.62
12 GFF967 Pyruvate dehydrogenase E1 component (EC 1.2.4.1) 0.72 0.61
13 GFF2379 Serine/threonine protein kinase no 0.59
14 GFF5604 D-xylose ABC transporter, permease protein XylH no 0.59
15 GFF5598 putative phospholipase D family protein no 0.58
16 GFF4485 FIG00715336: hypothetical protein no 0.58
17 GFF3254 Phosphotransferase involved in threonylcarbamoyladenosine t(6)A37 formation in tRNA no 0.57
18 GFF6290 RNA polymerase sigma-54 factor RpoN 0.93 0.56
19 GFF255 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase (EC 2.3.1.117) no 0.56
20 GFF2707 hypothetical protein no 0.56

Or look for negative cofitness