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  • Top cofit genes for GFF3886 from Sphingobium sp. HT1-2

    Uracil-DNA glycosylase, family 5 (EC 3.2.2.27)
    SEED: Uracil-DNA glycosylase, family 5

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF4421 Sulfide:quinone oxidoreductase, Type II no 0.70
    2 GFF4734 hypothetical protein no 0.69
    3 GFF4260 Single-stranded DNA-binding protein no 0.69
    4 GFF3952 Efflux transport system, outer membrane factor (OMF) lipoprotein no 0.67
    5 GFF4879 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) no 0.67
    6 GFF4303 IncF plasmid conjugative transfer protein TrbC no 0.66
    7 GFF349 Capsule polysaccharide export protein no 0.64
    8 GFF3700 Two-component system sensor histidine kinase no 0.64
    9 GFF1781 Gene Transfer Agent prohead protease no 0.64
    10 GFF5239 Polyhydroxyalkanoic acid synthase no 0.63
    11 GFF36 hypothetical protein no 0.63
    12 GFF3486 COGs COG3558 no 0.63
    13 GFF146 Protease II (EC 3.4.21.83) no 0.61
    14 GFF297 hypothetical protein no 0.61
    15 GFF2495 RND efflux system, inner membrane transporter no 0.61
    16 GFF3748 hypothetical protein no 0.60
    17 GFF2501 Two-component system sensor histidine kinase no 0.60
    18 GFF5172 group 1 glycosyl transferase no 0.60
    19 GFF2717 hypothetical protein no 0.60
    20 GFF502 hypothetical protein no 0.59

    Or look for negative cofitness