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  • Top cofit genes for GFF3880 from Variovorax sp. SCN45

    Cell division integral membrane protein, YggT and half-length relatives
    SEED: Integral membrane protein YggT, involved in response to extracytoplasmic stress (osmotic shock)
    KEGG: YggT family protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF4410 Transcriptional regulator, LysR family no 0.69
    2 GFF245 Aspartate aminotransferase (EC 2.6.1.1) no 0.64
    3 GFF3819 hypothetical protein no 0.64
    4 GFF2830 Uncharacterized protein CC_3061 no 0.61
    5 GFF3877 Uncharacterized chaperone protein YegD no 0.56
    6 GFF1842 Transcriptional regulator, LysR family no 0.54
    7 GFF5326 Deoxyguanosinetriphosphate triphosphohydrolase (EC 3.1.5.1) no 0.54
    8 GFF6173 Na(+) H(+) antiporter subunit A / Na(+) H(+) antiporter subunit B no 0.53
    9 GFF7325 Glucans biosynthesis glucosyltransferase H 0.53 0.53
    10 GFF4810 Ferrichrome-iron receptor no 0.52
    11 GFF5519 Transcriptional regulator no 0.51
    12 GFF3299 Pirin no 0.51
    13 GFF3788 putative secreted protein no 0.50
    14 GFF2922 Oxidoreductase, short-chain dehydrogenase/reductase family no 0.50
    15 GFF4619 Altronate dehydratase (EC 4.2.1.7) no 0.49
    16 GFF3434 Organic hydroperoxide resistance protein no 0.48
    17 GFF6315 Pyrophosphate-dependent fructose 6-phosphate-1-kinase (EC 2.7.1.90) no 0.48
    18 GFF4404 Mobile element protein no 0.48
    19 GFF375 hypothetical protein no 0.48
    20 GFF5469 Hydroxymethylpyrimidine ABC transporter, transmembrane component no 0.47

    Or look for negative cofitness