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  • Top cofit genes for GFF3879 from Variovorax sp. SCN45

    Uncharacterized protein, similar to the N-terminal domain of Lon protease
    SEED: Uncharacterized protein, similar to the N-terminal domain of Lon protease

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF3701 FIG004694: Hypothetical protein 0.31 0.57
    2 GFF5630 hypothetical protein no 0.52
    3 GFF7255 BUG/TctC family periplasmic protein no 0.52
    4 GFF7268 BUG/TctC family periplasmic protein no 0.51
    5 GFF6849 MotA/TolQ/ExbB proton channel family protein no 0.50
    6 GFF89 hypothetical protein no 0.50
    7 GFF2072 Phosphate starvation-inducible protein PhoH, predicted ATPase 0.50 0.50
    8 GFF4187 hypothetical protein no 0.50
    9 GFF5769 Chemotaxis response - phosphatase CheZ 0.46 0.49
    10 GFF3136 no description no 0.49
    11 GFF3706 ABC transporter, permease protein 2 (cluster 11, riboflavin/purine nucleoside/unknown) no 0.49
    12 GFF3956 no description no 0.48
    13 GFF499 hypothetical protein no 0.48
    14 GFF3965 Alcohol dehydrogenase, zinc-binding no 0.46
    15 GFF2802 DUF1176 domain-containing protein no 0.46
    16 GFF2687 Protein containing domains DUF404, DUF407, DUF403 0.39 0.46
    17 GFF2849 hypothetical protein 0.45 0.46
    18 GFF5269 4-hydroxythreonine-4-phosphate dehydrogenase (EC 1.1.1.262) no 0.45
    19 GFF500 Lysine exporter protein (LYSE/YGGA) 0.28 0.44
    20 GFF2051 FIG00463476: hypothetical protein 0.31 0.44

    Or look for negative cofitness