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  • Top cofit genes for GFF3866 from Variovorax sp. SCN45

    HtrA protease/chaperone protein
    SEED: HtrA protease/chaperone protein
    KEGG:

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF5869 internalin, putative no 0.70
    2 GFF5868 hypothetical protein no 0.64
    3 GFF5870 hypothetical protein no 0.63
    4 GFF5410 Adenylate cyclase (EC 4.6.1.1) no 0.62
    5 GFF5871 hypothetical protein no 0.62
    6 GFF5064 Exonuclease SbcC no 0.61
    7 GFF6037 Transcriptional regulator, Crp/Fnr family no 0.59
    8 GFF4009 D-amino acid dehydrogenase (EC 1.4.99.6) 0.25 0.59
    9 GFF5957 Uncharacterized MFS-type transporter no 0.58
    10 GFF5487 Thymidine phosphorylase (EC 2.4.2.4) no 0.58
    11 GFF305 uncharacterized domain / RidA/YER057c/UK114 superfamily, group 5 no 0.54
    12 GFF5150 Taurine ABC transporter, permease protein TauC no 0.54
    13 GFF96 RNA polymerase ECF-type sigma factor no 0.53
    14 GFF3313 Response regulator CreB of two-component signal transduction system CreBC 0.44 0.53
    15 GFF2454 Transcriptional regulator, GntR family domain / Aspartate aminotransferase (EC 2.6.1.1) no 0.52
    16 GFF183 Virulence protein no 0.52
    17 GFF7149 4-hydroxyproline epimerase (EC 5.1.1.8) no 0.52
    18 GFF1921 ABC transporter, substrate-binding protein (cluster 10, nitrate/sulfonate/bicarbonate) no 0.52
    19 GFF5659 Formate dehydrogenase O alpha subunit (EC 1.2.1.2) @ selenocysteine-containing no 0.51
    20 GFF2575 Quinolinate synthetase (EC 2.5.1.72) no 0.51

    Or look for negative cofitness