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  • Top cofit genes for PS417_19780 from Pseudomonas simiae WCS417

    anti-anti-sigma factor
    SEED: Anti-sigma F factor antagonist (spoIIAA-2); Anti-sigma B factor antagonist RsbV

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_05985 chemotaxis protein CheY 0.70 0.35
    2 PS417_19145 membrane protein 0.75 0.33
    3 PS417_02210 diguanylate cyclase 0.90 0.33
    4 PS417_05975 chemotaxis protein CheW no 0.31
    5 PS417_25775 lipoprotein no 0.30
    6 PS417_23950 polynucleotide phosphorylase/polyadenylase 0.33 0.30
    7 PS417_22190 diguanylate cyclase 0.80 0.29
    8 PS417_21050 serine acetyltransferase 0.27 0.28
    9 PS417_04650 D-alanine--D-alanine ligase no 0.28
    10 PS417_16145 sulfonate ABC transporter permease no 0.27
    11 PS417_12920 endoribonuclease no 0.27
    12 PS417_03725 acyltransferase no 0.27
    13 PS417_03930 thymidine phosphorylase 0.33 0.27
    14 PS417_27665 diguanylate cyclase 0.27 0.26
    15 PS417_01015 polar amino acid ABC transporter permease no 0.26
    16 PS417_07095 histidine kinase 0.41 0.26
    17 PS417_13425 cupin no 0.25
    18 PS417_18870 hypothetical protein no 0.25
    19 PS417_17110 spore coat protein no 0.25
    20 PS417_19560 amino acid ABC transporter substrate-binding protein no 0.24

    Or look for negative cofitness