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  • Top cofit genes for PS417_19775 from Pseudomonas simiae WCS417

    chemotaxis protein CheY
    SEED: Serine phosphatase RsbU, regulator of sigma subunit

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_24595 histidine kinase 0.86 0.52
    2 PS417_06365 RNA polymerase sigma factor 0.59 0.41
    3 PS417_16370 chemotaxis protein CheY 0.76 0.38
    4 PS417_10720 chemotaxis protein CheY 0.90 0.38
    5 PS417_22710 TonB-dependent receptor no 0.38
    6 PS417_21045 cysteine synthase no 0.38
    7 PS417_28265 pyridoxamine kinase no 0.38
    8 PS417_27605 hypothetical protein 0.31 0.36
    9 PS417_27505 transcriptional regulator 0.26 0.35
    10 PS417_00655 DSBA oxidoreductase no 0.34
    11 PS417_08985 histidine kinase 0.37 0.34
    12 PS417_19560 amino acid ABC transporter substrate-binding protein 0.56 0.34
    13 PS417_20955 secretion protein no 0.34
    14 PS417_11940 TonB-dependent receptor no 0.34
    15 PS417_18970 hypothetical protein no 0.34
    16 PS417_12550 chemotaxis protein no 0.33
    17 PS417_00665 RND transporter no 0.33
    18 PS417_24885 transcriptional regulator no 0.32
    19 PS417_16160 ABC transporter substrate-binding protein no 0.32
    20 PS417_03990 ligand-gated channel protein no 0.32

    Or look for negative cofitness