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Cofit
Protein
Homologs
Top cofit genes for GFF3862 from
Variovorax sp. SCN45
hypothetical protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF4410
Transcriptional regulator, LysR family
no
0.53
2
GFF4846
Conjugative transfer protein TrbE
no
0.53
3
GFF326
Polysaccharide deacetylase, caspase activity
no
0.50
4
GFF6115
ABC transporter, substrate-binding protein (cluster 5, nickel/peptides/opines)
no
0.49
5
GFF3650
FIG00932140: hypothetical protein
no
0.49
6
GFF5838
Probable signal peptide protein precursor
no
0.49
7
GFF5056
Fumarylacetoacetase (EC 3.7.1.2)
no
0.48
8
GFF6173
Na(+) H(+) antiporter subunit A / Na(+) H(+) antiporter subunit B
no
0.48
9
GFF4396
Mobile element protein
no
0.48
10
GFF7204
no description
no
0.47
11
GFF3698
ATP-dependent, 3'-5' DNA helicase with strand annealing activity
no
0.46
12
GFF3877
Uncharacterized chaperone protein YegD
no
0.46
13
GFF6315
Pyrophosphate-dependent fructose 6-phosphate-1-kinase (EC 2.7.1.90)
no
0.46
14
GFF6299
BUG/TctC family periplasmic protein
no
0.46
15
GFF6491
SAM-dependent methyltransferase
no
0.46
16
GFF3921
Tryptophan 2,3-dioxygenase (EC 1.13.11.11)
no
0.46
17
GFF6984
RNA polymerase sigma factor for flagellar operon
no
0.46
18
GFF5860
no description
no
0.45
19
GFF3922
Kynureninase (EC 3.7.1.3)
no
0.45
20
GFF5038
Tetracycline resistance, MFS efflux pump => Tet(C)
no
0.45
Or look for
negative cofitness