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  • Top cofit genes for GFF3850 from Variovorax sp. SCN45

    Periplasmic serine proteases (ClpP class)
    SEED: Periplasmic serine proteases (ClpP class)
    KEGG: protease IV

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF3906 Acyl-CoA dehydrogenase no 0.66
    2 GFF4406 Alkane-1 monooxygenase (EC 1.14.15.3) no 0.65
    3 GFF7375 Arginine:pyruvate transaminase no 0.62
    4 GFF6173 Na(+) H(+) antiporter subunit A / Na(+) H(+) antiporter subunit B 0.60 0.62
    5 GFF7373 CaiB/BaiF family protein no 0.60
    6 GFF7371 Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A (EC 2.8.3.5) no 0.59
    7 GFF2649 putative autotransporter protein no 0.58
    8 GFF6294 Cell division protein 0.48 0.57
    9 GFF4857 benzoate MFS transporter BenK no 0.57
    10 GFF6392 hypothetical protein 0.54 0.56
    11 GFF2752 FIG00974677: hypothetical protein no 0.56
    12 GFF5856 Outer membrane receptor proteins, likely involved in siderophore uptake 0.48 0.56
    13 GFF4801 DedA protein 0.42 0.56
    14 GFF7374 FIG00984748: hypothetical protein no 0.56
    15 GFF4397 hypothetical protein no 0.56
    16 GFF3875 beta-N-acetylglucosaminidase (EC 3.2.1.52) no 0.55
    17 GFF5855 T1SS secreted agglutinin RTX no 0.55
    18 GFF492 no description no 0.55
    19 GFF5860 no description no 0.55
    20 GFF4396 Mobile element protein no 0.54

    Or look for negative cofitness