• Private Fitness
  • Home
  • Find Gene
  • BLAST
  • Experiments
  • Organisms
  • Help
  • Gene
  • Fitness
  • Nearby
  • Cofit
  • Protein
  • Homologs
  • Top cofit genes for GFF3845 from Variovorax sp. SCN45

    Ribonuclease E (EC 3.1.26.12)
    SEED: Ribonuclease E (EC 3.1.26.12)

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF1159 Acetolactate synthase small subunit (EC 2.2.1.6) no 0.83
    2 GFF3960 3'-to-5' oligoribonuclease (orn) no 0.82
    3 GFF2141 GTP-binding and nucleic acid-binding protein YchF no 0.82
    4 GFF4454 Exoribonuclease II (EC 3.1.13.1) no 0.82
    5 GFF6129 (2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10) no 0.81
    6 GFF2523 Peptide chain release factor N(5)-glutamine methyltransferase (EC 2.1.1.297) no 0.81
    7 GFF4398 Transcriptional regulator, AcrR family no 0.80
    8 GFF399 3'-to-5' exoribonuclease RNase R no 0.79
    9 GFF5384 Proteins containing SET domain no 0.79
    10 GFF4557 Dihydroorotase (EC 3.5.2.3) no 0.79
    11 GFF213 tmRNA-binding protein SmpB no 0.79
    12 GFF4437 Low-complexity acidic protein, XCC2875 type no 0.79
    13 GFF2499 ATP/GTP-binding protein no 0.78
    14 GFF1917 ATP-dependent RNA helicase Bcep18194_A5658 no 0.78
    15 GFF4006 DNA polymerase I (EC 2.7.7.7) no 0.78
    16 GFF575 Tol-Pal system protein TolQ no 0.78
    17 GFF2852 Peptidyl-prolyl cis-trans isomerase PpiD (EC 5.2.1.8) no 0.77
    18 GFF292 Tol-Pal system beta propeller repeat protein TolB no 0.77
    19 GFF487 ATP-dependent protease La (EC 3.4.21.53) Type I no 0.77
    20 GFF6634 DNA mismatch repair protein MutS no 0.77

    Or look for negative cofitness