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  • Top cofit genes for GFF3842 from Sphingobium sp. HT1-2

    ABC-type antimicrobial peptide transport system, ATPase component
    SEED: ABC transporter ATP-binding protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF1078 Hydroxyacylglutathione hydrolase (EC 3.1.2.6) no 0.83
    2 GFF1241 Transcriptional regulator, AraC family no 0.78
    3 GFF2866 Protocatechuate 4,5-dioxygenase beta chain (EC 1.13.11.8) no 0.76
    4 GFF229 Short-chain dehydrogenase/reductase SDR no 0.74
    5 GFF3514 General secretion pathway protein I no 0.74
    6 GFF2841 HlyD-like membrane fusion protein YhiI 0.25 0.74
    7 GFF1246 FIG00854991: hypothetical protein no 0.74
    8 GFF2412 Flp pilus assembly protein, pilin Flp no 0.74
    9 GFF2065 D-threo-3-hydroxyaspartate ammonia-lyase (EC 4.3.1.-) no 0.73
    10 GFF3475 Uncharacterized protein YnbE no 0.73
    11 GFF2563 hypothetical protein no 0.73
    12 GFF4425 LysR-family transcriptional regulator similar to hydrogen peroxide-inducible genes activator no 0.72
    13 GFF1837 Inner membrane transport protein YdhP no 0.72
    14 GFF2378 hypothetical protein no 0.72
    15 GFF3069 hypothetical protein no 0.71
    16 GFF4798 hypothetical protein no 0.70
    17 GFF3247 Transglycosylase-associated protein no 0.70
    18 GFF4550 hypothetical protein no 0.70
    19 GFF1661 L,D-transpeptidase no 0.69
    20 GFF1742 hypothetical protein no 0.69

    Or look for negative cofitness