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  • Top cofit genes for PS417_01950 from Pseudomonas simiae WCS417

    malate dehydrogenase
    SEED: NADP-dependent malic enzyme (EC 1.1.1.40)
    KEGG: malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+)

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_07640 glyceraldehyde-3-phosphate dehydrogenase 0.66 0.42
    2 PS417_24765 membrane protein no 0.42
    3 PS417_25920 pyrroloquinoline quinone biosynthesis protein PqqF 0.32 0.36
    4 PS417_24810 aldehyde dehydrogenase no 0.35
    5 PS417_21750 acetyl-CoA synthetase 0.83 0.34
    6 PS417_16465 sirohydrochlorin ferrochelatase 0.57 0.34
    7 PS417_23805 acetolactate synthase 3 regulatory subunit 0.48 0.33
    8 PS417_25930 pyrroloquinoline quinone biosynthesis protein PqqC no 0.33
    9 PS417_21025 PEP synthetase regulatory protein 0.53 0.33
    10 PS417_17420 ethanol oxidation regulatory protein ercA (from data) no 0.32
    11 PS417_16570 isocitrate lyase 0.66 0.32
    12 PS417_25940 pyrroloquinoline quinone biosynthesis protein PqqE no 0.32
    13 PS417_12290 sulfite reductase 0.55 0.32
    14 PS417_11845 RpiR family transcriptional regulator 0.45 0.32
    15 PS417_26995 phosphoserine phosphatase 0.54 0.32
    16 PS417_25715 anthranilate phosphoribosyltransferase 0.51 0.32
    17 PS417_25725 anthranilate synthase component I 0.57 0.31
    18 PS417_23810 acetolactate synthase 3 catalytic subunit 0.51 0.31
    19 PS417_18560 N-(5'-phosphoribosyl)anthranilate isomerase 0.51 0.31
    20 PS417_26040 malate synthase 0.72 0.31

    Or look for negative cofitness