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  • Top cofit genes for GFF3828 from Variovorax sp. SCN45

    hypothetical protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF5582 BUG/TctC family periplasmic protein no 0.63
    2 GFF2210 Type II/IV secretion system secretin RcpA/CpaC, associated with Flp pilus assembly no 0.63
    3 GFF5248 Outer membrane porin protein 32 precursor no 0.61
    4 GFF4068 Heavy metal sensor histidine kinase no 0.60
    5 GFF4253 hypothetical protein no 0.56
    6 GFF6585 D-glycerate 2-kinase (EC 2.7.1.165) no 0.54
    7 GFF715 hypothetical protein no 0.53
    8 GFF4698 Transcriptional regulator of various polyols utilization, AraC family no 0.53
    9 GFF613 hypothetical protein no 0.53
    10 GFF6270 Uncharacterized MFS-type transporter no 0.52
    11 GFF6122 ABC-type antimicrobial peptide transport system, permease component no 0.52
    12 GFF5145 hypothetical protein no 0.51
    13 GFF4649 Iron-chelator utilization protein no 0.50
    14 GFF7313 hypothetical protein no 0.50
    15 GFF452 Chloride channel protein no 0.50
    16 GFF2313 Two-component system sensor histidine kinase no 0.50
    17 GFF5325 3-dehydroquinate synthase (EC 4.2.3.4) no 0.50
    18 GFF5796 no description no 0.50
    19 GFF2223 ABC transporter, ATP-binding protein 2 (cluster 4, leucine/isoleucine/valine/benzoate) no 0.50
    20 GFF4676 hypothetical protein no 0.50

    Or look for negative cofitness