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  • Top cofit genes for GFF3823 from Sphingobium sp. HT1-2

    DNA-binding response regulator ChvI
    SEED: DNA-binding response regulator ChvI
    KEGG: two-component system, OmpR family, response regulator ChvI

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF3822 Sensor histidine kinase ChvG (EC 2.7.3.-) 0.98 0.92
    2 GFF2462 hypothetical protein no 0.89
    3 GFF2326 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) no 0.84
    4 GFF5266 Mobile element protein no 0.84
    5 GFF4230 hypothetical protein no 0.82
    6 GFF1818 Dna binding response regulator PrrA (RegA) no 0.82
    7 GFF492 Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4) no 0.81
    8 GFF4232 hypothetical protein no 0.79
    9 GFF444 hypothetical protein no 0.79
    10 GFF5020 Usg protein no 0.79
    11 GFF951 2-Keto-3-deoxy-D-manno-octulosonate-8-phosphate synthase (EC 2.5.1.55) no 0.78
    12 GFF5035 Fructokinase (EC 2.7.1.4) no 0.78
    13 GFF4534 Bll3818 protein no 0.77
    14 GFF3291 Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94) 0.24 0.77
    15 GFF5199 hypothetical protein no 0.77
    16 GFF3772 D-lactate dehydrogenase (EC 1.1.1.28) 0.22 0.77
    17 GFF4234 hypothetical protein no 0.77
    18 GFF5381 LSU rRNA ## 23S rRNA, large subunit ribosomal RNA no 0.77
    19 GFF5172 group 1 glycosyl transferase no 0.77
    20 GFF2456 hypothetical protein no 0.77

    Or look for negative cofitness