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  • Top cofit genes for PS417_19570 from Pseudomonas simiae WCS417

    terpene utilization protein AtuA
    SEED: 3-hydroxy-3isohexenylglutaryl-CoA:acetate lyase

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_03930 thymidine phosphorylase no 0.27
    2 PS417_20585 chemotaxis protein no 0.26
    3 PS417_19625 histidine kinase 0.56 0.24
    4 PS417_19965 histidine kinase no 0.23
    5 PS417_19365 ABC transporter substrate-binding protein no 0.23
    6 PS417_19635 lipid kinase no 0.23
    7 PS417_19610 molybdenum cofactor sulfurase no 0.23
    8 PS417_19595 3-methylcrotonyl-CoA carboxylase no 0.23
    9 PS417_05135 nucleoid-associated protein no 0.23
    10 PS417_19630 LuxR family transcriptional regulator no 0.22
    11 PS417_18900 alkanesulfonate transporter no 0.22
    12 PS417_17485 membrane protein no 0.22
    13 PS417_26050 response regulator no 0.22
    14 PS417_17495 multidrug ABC transporter permease no 0.21
    15 PS417_19585 acyl-CoA dehydrogenase 0.26 0.21
    16 PS417_17435 dehydrogenase no 0.21
    17 PS417_25115 lipopolysaccharide biosynthesis protein no 0.21
    18 PS417_00630 nitrate ABC transporter substrate-binding protein no 0.21
    19 PS417_17480 branched-chain amino acid ABC transporter substrate-binding protein no 0.21
    20 PS417_19930 DNA methyltransferase no 0.21

    Or look for negative cofitness