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  • Top cofit genes for PS417_19565 from Pseudomonas simiae WCS417

    TetR family transcriptional regulator
    SEED: Acyclic terpenes utilization regulator AtuR, TetR family

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_16990 acyl-CoA dehydrogenase 0.74 0.28
    2 PS417_11530 amidase no 0.28
    3 PS417_26890 dihydroxy-acid dehydratase 0.80 0.27
    4 PS417_25650 anhydro-N-acetylmuramic acid kinase 0.53 0.26
    5 PS417_18595 3-isopropylmalate dehydratase 0.87 0.26
    6 PS417_18585 3-isopropylmalate dehydrogenase 0.89 0.26
    7 PS417_05570 DeoR faimly transcriptional regulator 0.51 0.25
    8 PS417_17565 branched-chain amino acid aminotransferase 0.84 0.25
    9 PS417_23800 ketol-acid reductoisomerase 0.86 0.25
    10 PS417_26745 methionine biosynthesis protein MetW 0.80 0.25
    11 PS417_01570 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase 0.87 0.25
    12 PS417_18560 N-(5'-phosphoribosyl)anthranilate isomerase 0.40 0.25
    13 PS417_25790 aminoglycoside phosphotransferase 0.55 0.24
    14 PS417_27040 3-phosphoglycerate dehydrogenase 0.85 0.24
    15 PS417_09965 hypothetical protein no 0.24
    16 PS417_23110 2-isopropylmalate synthase 0.89 0.24
    17 PS417_18600 isopropylmalate isomerase 0.87 0.23
    18 PS417_13670 protease no 0.23
    19 PS417_00185 tryptophan synthase subunit beta 0.43 0.23
    20 PS417_16005 ATPase 0.30 0.23

    Or look for negative cofitness