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  • Top cofit genes for GFF3821 from Variovorax sp. SCN45

    RND efflux system, inner membrane transporter
    SEED: RND efflux system, inner membrane transporter CmeB
    KEGG: hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF492 no description no 0.54
    2 GFF6391 RfbJ protein no 0.52
    3 GFF4408 3-methylmercaptopropionyl-CoA ligase (EC 6.2.1.44) of DmdB2 type no 0.51
    4 GFF7162 DNA helicase II related protein no 0.49
    5 GFF5783 hypothetical protein no 0.49
    6 GFF6284 Cytochrome b561 no 0.49
    7 GFF6487 Gfa-like protein no 0.48
    8 GFF5163 Soluble lytic murein transglycosylase (EC 4.2.2.n1) no 0.48
    9 GFF3920 FIG00467295: hypothetical protein no 0.47
    10 GFF1509 ABC transporter, permease protein 1 (cluster 5, nickel/peptides/opines) no 0.47
    11 GFF7159 Putative reductase no 0.46
    12 GFF2024 L-lysine permease no 0.45
    13 GFF4917 no description no 0.45
    14 GFF5442 Septum-associated rare lipoprotein A no 0.45
    15 GFF36 Similar to Agmatine deiminase no 0.45
    16 GFF954 hypothetical protein no 0.45
    17 GFF1866 Dihydropyrimidinase (EC 3.5.2.2) @ D-hydantoinase (EC 3.5.2.2) no 0.45
    18 GFF6719 hypothetical protein no 0.44
    19 GFF7386 no description no 0.44
    20 GFF4720 Putrescine transport system permease protein potI no 0.44

    Or look for negative cofitness