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  • Top cofit genes for PS417_19560 from Pseudomonas simiae WCS417

    amino acid ABC transporter substrate-binding protein
    SEED: Periplasmic binding protein

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_16370 chemotaxis protein CheY 0.89 0.85
    2 PS417_10720 chemotaxis protein CheY 0.89 0.84
    3 PS417_28265 pyridoxamine kinase 0.44 0.74
    4 PS417_16160 ABC transporter substrate-binding protein no 0.72
    5 PS417_24885 transcriptional regulator no 0.69
    6 PS417_24595 histidine kinase 0.81 0.69
    7 PS417_09665 dimethylglycine dehydrogenase no 0.68
    8 PS417_12550 chemotaxis protein no 0.66
    9 PS417_11445 enoyl-CoA hydratase no 0.66
    10 PS417_03725 acyltransferase 0.64 0.66
    11 PS417_06970 LysR family transcriptional regulator no 0.63
    12 PS417_06365 RNA polymerase sigma factor 0.83 0.62
    13 PS417_08985 histidine kinase 0.73 0.59
    14 PS417_13940 racemase no 0.58
    15 PS417_12920 endoribonuclease no 0.58
    16 PS417_11450 AraC family transcriptional regulator no 0.56
    17 PS417_16070 TonB-dependent receptor no 0.52
    18 PS417_07615 TetR family transcriptional regulator 0.61 0.52
    19 PS417_21375 ADP-ribosylglycohydrolase 0.56 0.51
    20 PS417_01895 poly(R)-hydroxyalkanoic acid synthase no 0.51

    Or look for negative cofitness