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  • Top cofit genes for GFF3819 from Sphingobium sp. HT1-2

    PTS system permease (IIAMan), nitrogen regulatory IIA protein
    SEED: PTS system permease (IIAMan), nitrogen regulatory IIA protein
    KEGG: PTS system, mannose-specific IIA component

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF2792 hypothetical protein no 0.85
    2 GFF240 ABC transporter, substrate-binding protein (cluster 5, nickel/peptides/opines) no 0.85
    3 GFF1715 hypothetical protein 0.49 0.82
    4 GFF2249 Outer membrane component of TAM transport system no 0.81
    5 GFF2742 Transcriptional repressor of ectoine biosynthetic genes no 0.81
    6 GFF4062 LSU rRNA pseudouridine(1911/1915/1917) synthase (EC 5.4.99.23) no 0.80
    7 GFF3473 ATP synthase protein I no 0.79
    8 GFF2781 Quino(hemo)protein alcohol dehydrogenase, PQQ-dependent (EC 1.1.2.8) no 0.79
    9 GFF3480 ATP-dependent RNA helicase Atu1833 no 0.79
    10 GFF646 Aspartate aminotransferase (EC 2.6.1.1) 0.94 0.77
    11 GFF1519 Protein containing domains DUF403 no 0.77
    12 GFF626 Efflux ABC transporter, permease/ATP-binding protein no 0.76
    13 GFF1714 putative membrane protein 0.40 0.76
    14 GFF3325 YdcF-like protein no 0.76
    15 GFF4055 ATP-dependent Clp protease ATP-binding subunit ClpX 0.57 0.75
    16 GFF2701 Cobalt/zinc/cadmium resistance protein CzcD no 0.75
    17 GFF1149 Nitrogen regulation protein NtrB (EC 2.7.13.3) no 0.75
    18 GFF981 hypothetical protein no 0.74
    19 GFF897 hypothetical protein no 0.74
    20 GFF4911 Transcriptional regulator, AraC family no 0.73

    Or look for negative cofitness