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  • Top cofit genes for PS417_19520 from Pseudomonas simiae WCS417

    transcriptional regulator
    SEED: Two-component system response regulator QseB

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_03625 lipid A 3-O-deacylase 0.22 0.21
    2 PS417_23525 glycoside hydrolase no 0.21
    3 PS417_17395 MFS transporter 0.70 0.20
    4 PS417_08955 pimeloyl-CoA dehydrogenase no 0.19
    5 PS417_02725 hypothetical protein no 0.18
    6 PS417_18570 peptidoglycan-binding protein 0.20 0.18
    7 PS417_02795 acetyltransferase no 0.17
    8 PS417_02225 bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase no 0.17
    9 PS417_09660 lysine transporter LysE no 0.17
    10 PS417_14920 CoA-transferase 0.27 0.17
    11 PS417_18990 membrane protein no 0.16
    12 PS417_18090 iron ABC transporter no 0.16
    13 PS417_14020 diguanylate phosphodiesterase no 0.16
    14 PS417_08325 acyl-CoA thioesterase no 0.16
    15 PS417_21905 allophanate hydrolase 0.29 0.16
    16 PS417_16920 multidrug RND transporter no 0.16
    17 PS417_06330 S-(hydroxymethyl)glutathione dehydrogenase no 0.16
    18 PS417_13950 LuxR family transcriptional regulator no 0.16
    19 PS417_20830 transporter no 0.15
    20 PS417_14560 TonB-dependent receptor no 0.15

    Or look for negative cofitness