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  • Top cofit genes for GFF3809 from Variovorax sp. SCN45

    Outer membrane receptor proteins, mostly Fe transport
    SEED: Outer membrane receptor proteins, mostly Fe transport
    KEGG: iron complex outermembrane recepter protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF3662 hypothetical protein no 0.61
    2 GFF2183 Outer membrane component of TAM transport system no 0.57
    3 GFF5605 D-xylose ABC transporter, ATP-binding protein XylG no 0.57
    4 GFF2182 Inner membrane component of TAM transport system no 0.56
    5 GFF7085 BUG/TctC family periplasmic protein no 0.56
    6 GFF3715 Probable malonic semialdehyde reductase RutE (EC 1.1.1.298) no 0.56
    7 GFF5604 D-xylose ABC transporter, permease protein XylH no 0.53
    8 GFF6279 hypothetical protein no 0.53
    9 GFF6026 no description no 0.53
    10 GFF6595 Glycolate dehydrogenase (EC 1.1.99.14), subunit GlcD no 0.52
    11 GFF3811 Cardiolipin synthase (EC 2.7.8.-) phosphatidylethanolamine-utilizing, bacterial type ClsC no 0.52
    12 GFF5402 Transcriptional regulator, IclR family no 0.52
    13 GFF7322 hypothetical protein no 0.51
    14 GFF4421 Conjugative transfer protein TrbF no 0.51
    15 GFF5021 Tripartite tricarboxylate transporter TctA family no 0.50
    16 GFF6301 Pyruvate:Oxaloacetate transcarboxylase domain protein no 0.49
    17 GFF5117 Transcriptional regulator, LysR family no 0.49
    18 GFF592 Glutamyl-Q tRNA(Asp) synthetase no 0.49
    19 GFF217 Orf21; putative lipoprotein no 0.49
    20 GFF6433 hypothetical protein no 0.49

    Or look for negative cofitness