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  • Top cofit genes for GFF3804 from Variovorax sp. SCN45

    BUG/TctC family periplasmic protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF3904 Probable signal peptide protein no 0.59
    2 GFF2085 Acyl-CoA:1-acyl-sn-glycerol-3-phosphate acyltransferase (EC 2.3.1.51) no 0.57
    3 GFF1790 Hydroxymethylpyrimidine ABC transporter, ATPase component no 0.56
    4 GFF2793 Tricarboxylate transport protein TctC 0.28 0.54
    5 GFF1086 putative Glutathione-regulated potassium-efflux system protein KefB no 0.53
    6 GFF4967 Glutathione S-transferase family protein no 0.52
    7 GFF7143 Permease of the drug/metabolite transporter (DMT) superfamily no 0.52
    8 GFF4817 Hydroxymethylpyrimidine ABC transporter, ATPase component no 0.51
    9 GFF3561 Glycosyltransferases involved in cell wall biogenesis no 0.51
    10 GFF7216 hypothetical protein no 0.51
    11 GFF582 Two-component system sensor histidine kinase no 0.50
    12 GFF2450 Dihydropyrimidinase (EC 3.5.2.2) @ D-hydantoinase (EC 3.5.2.2) no 0.50
    13 GFF2249 no description no 0.50
    14 GFF2064 Anhydro-N-acetylmuramic acid kinase (EC 2.7.1.170) no 0.49
    15 GFF4332 Aldehyde dehydrogenase (EC 1.2.1.3) no 0.49
    16 GFF6682 Efflux ABC transporter, permease protein no 0.48
    17 GFF5769 Chemotaxis response - phosphatase CheZ no 0.48
    18 GFF4162 Aldehyde dehydrogenase B (EC 1.2.1.22) no 0.47
    19 GFF2277 ABC transporter, ATP-binding protein 2 (cluster 4, leucine/isoleucine/valine/benzoate) no 0.47
    20 GFF6968 no description no 0.47

    Or look for negative cofitness