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  • Top cofit genes for GFF379 from Variovorax sp. SCN45

    Ribonuclease HII (EC 3.1.26.4)
    SEED: Ribonuclease HII (EC 3.1.26.4)
    KEGG: ribonuclease HII

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF4928 hypothetical protein no 0.64
    2 GFF7345 Periplasmic aromatic aldehyde oxidoreductase, iron-sulfur subunit YagT 0.32 0.57
    3 GFF3659 Two-component transcriptional response regulator, OmpR family no 0.56
    4 GFF5502 Transcriptional regulator, LysR family no 0.56
    5 GFF419 hypothetical protein no 0.54
    6 GFF4938 no description no 0.52
    7 GFF1481 L-carnitine dehydratase/bile acid-inducible protein F no 0.51
    8 GFF4645 GGDEF domain protein 0.34 0.51
    9 GFF6613 no description no 0.51
    10 GFF5239 hypothetical protein no 0.50
    11 GFF535 Transcriptional regulator, AraC family no 0.50
    12 GFF918 Omega-amino acid--pyruvate aminotransferase (EC 2.6.1.18) no 0.49
    13 GFF5995 LysR family transcriptional regulator STM3121 0.50 0.49
    14 GFF7308 Uncharacterized MFS-type transporter no 0.48
    15 GFF2244 hypothetical protein no 0.47
    16 GFF6819 hypothetical protein no 0.47
    17 GFF10 Cobalt/zinc/cadmium efflux RND transporter, membrane fusion protein, CzcB family no 0.47
    18 GFF5043 ABC transporter, permease protein (cluster 9, phospholipid) 0.22 0.47
    19 GFF6801 Transcriptional regulator, GntR family no 0.47
    20 GFF803 MutT/Nudix family protein no 0.47

    Or look for negative cofitness