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  • Top cofit genes for GFF379 from Sphingobium sp. HT1-2

    Tim44-like domain protein
    SEED: Transporter

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF4162 Cell wall hydrolyses involved in spore germination no 0.89
    2 GFF2283 Quinone oxidoreductase (EC 1.6.5.5) no 0.89
    3 GFF4115 DNA-3-methyladenine glycosylase (EC 3.2.2.20) no 0.87
    4 GFF1660 NADP-dependent malic enzyme (EC 1.1.1.40) no 0.87
    5 GFF1678 Ferredoxin, 2Fe-2S no 0.86
    6 GFF1186 Nitrate ABC transporter, substrate-binding protein no 0.85
    7 GFF1275 Lysophospholipid transporter LplT no 0.84
    8 GFF4227 dTDP-glucose 4,6-dehydratase (EC 4.2.1.46) no 0.84
    9 GFF1150 tRNA-dihydrouridine synthase DusB no 0.84
    10 GFF2248 Inner membrane component of TAM transport system no 0.84
    11 GFF2596 hypothetical protein no 0.83
    12 GFF2286 ATP-dependent Clp protease ATP-binding subunit ClpA 0.46 0.83
    13 GFF143 PhbF no 0.83
    14 GFF3097 Inner membrane component of TAM transport system no 0.82
    15 GFF3325 YdcF-like protein no 0.82
    16 GFF3462 Transcriptional regulator, LysR family no 0.82
    17 GFF776 RNA polymerase sigma-54 factor RpoN 0.47 0.81
    18 GFF1746 Efflux ABC transporter for glutathione/L-cysteine, essential for assembly of bd-type respiratory oxidases => CydD subunit no 0.81
    19 GFF148 ATP-dependent protease subunit HslV (EC 3.4.25.2) no 0.81
    20 GFF788 Phytoene desaturase (lycopene-forming) (EC 1.3.99.31) no 0.81

    Or look for negative cofitness