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Cofit
Protein
Homologs
Top cofit genes for GFF3789 from
Variovorax sp. SCN45
hypothetical protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF2111
Permease of the drug/metabolite transporter (DMT) superfamily
no
0.64
2
GFF5468
FAD/FMN-containing dehydrogenase
no
0.63
3
GFF4733
Nitric oxide -responding transcriptional regulator Dnr (Crp/Fnr family)
no
0.62
4
GFF6107
Zinc transporter, ZIP family
no
0.61
5
GFF1542
Anti-sigma B factor RsbT / Phosphoserine phosphatase RsbX (EC 3.1.3.3)
no
0.60
6
GFF4821
Transcriptional regulator, AcrR family
no
0.59
7
GFF3508
Multidrug efflux system, outer membrane factor lipoprotein => OpmD of MexHI-OpmD system
no
0.59
8
GFF2012
Putative transmembrane protein
no
0.58
9
GFF2283
Enoyl-CoA hydratase (EC 4.2.1.17)
no
0.58
10
GFF2718
ABC transporter, ATP-binding protein (cluster 3, basic aa/glutamine/opines)
no
0.57
11
GFF769
Conserved TM helix
no
0.57
12
GFF4228
2-hydroxychromene-2-carboxylate isomerase
no
0.57
13
GFF2474
Two-component transcriptional response regulator SMc02366, LuxR family
no
0.56
14
GFF6480
hypothetical protein
no
0.55
15
GFF5879
LemA
no
0.55
16
GFF2367
Transcriptional regulator, LysR family
no
0.54
17
GFF7368
Enoyl-CoA hydratase (EC 4.2.1.17)
no
0.54
18
GFF7043
Putative transmembrane protein
no
0.54
19
GFF5367
GTP cyclohydrolase 1 type 2 homolog YbgI
no
0.54
20
GFF1188
Thiazole synthase (EC 2.8.1.10)
no
0.54
Or look for
negative cofitness