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Cofit
Protein
Homologs
Top cofit genes for GFF3785 from
Variovorax sp. SCN45
Transcriptional regulator, AcrR family
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF3715
Probable malonic semialdehyde reductase RutE (EC 1.1.1.298)
no
0.50
2
GFF3373
Hydroxymethylglutaryl-CoA reductase (EC 1.1.1.34)
no
0.48
3
GFF1111
probable membrane protein NMA1176
no
0.46
4
GFF25
Alcohol dehydrogenase (EC 1.1.1.1)
0.50
0.46
5
GFF848
no description
no
0.45
6
GFF3799
Putative PROLIN-rich signal peptide protein
no
0.44
7
GFF7092
no description
no
0.44
8
GFF3506
Superoxide dismutase [Fe] (EC 1.15.1.1)
no
0.43
9
GFF6534
Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63)
no
0.42
10
GFF1282
Chromate reductase (EC 1.6.5.2)
no
0.42
11
GFF6576
Conjugative transfer protein TrbE
no
0.41
12
GFF6846
Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid
no
0.41
13
GFF6915
Alkyl hydroperoxide reductase and/or thiol-specific antioxidant family (AhpC/TSA) protein
no
0.41
14
GFF919
hypothetical protein
no
0.40
15
GFF7160
hypothetical protein
no
0.39
16
GFF5989
RND efflux system, membrane fusion protein
no
0.39
17
GFF4868
Type IV secretory pathway, VirD2 components (relaxase)
no
0.39
18
GFF6373
T6SS component TssA (ImpA)
no
0.38
19
GFF6271
Phosphatidylglycerophosphatase A (EC 3.1.3.27)
no
0.38
20
GFF5361
FIG146285: Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases
no
0.38
Or look for
negative cofitness