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  • Top cofit genes for GFF3785 from Variovorax sp. SCN45

    Transcriptional regulator, AcrR family

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF3715 Probable malonic semialdehyde reductase RutE (EC 1.1.1.298) no 0.50
    2 GFF3373 Hydroxymethylglutaryl-CoA reductase (EC 1.1.1.34) no 0.48
    3 GFF1111 probable membrane protein NMA1176 no 0.46
    4 GFF25 Alcohol dehydrogenase (EC 1.1.1.1) 0.50 0.46
    5 GFF848 no description no 0.45
    6 GFF3799 Putative PROLIN-rich signal peptide protein no 0.44
    7 GFF7092 no description no 0.44
    8 GFF3506 Superoxide dismutase [Fe] (EC 1.15.1.1) no 0.43
    9 GFF6534 Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63) no 0.42
    10 GFF1282 Chromate reductase (EC 1.6.5.2) no 0.42
    11 GFF6576 Conjugative transfer protein TrbE no 0.41
    12 GFF6846 Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid no 0.41
    13 GFF6915 Alkyl hydroperoxide reductase and/or thiol-specific antioxidant family (AhpC/TSA) protein no 0.41
    14 GFF919 hypothetical protein no 0.40
    15 GFF7160 hypothetical protein no 0.39
    16 GFF5989 RND efflux system, membrane fusion protein no 0.39
    17 GFF4868 Type IV secretory pathway, VirD2 components (relaxase) no 0.39
    18 GFF6373 T6SS component TssA (ImpA) no 0.38
    19 GFF6271 Phosphatidylglycerophosphatase A (EC 3.1.3.27) no 0.38
    20 GFF5361 FIG146285: Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases no 0.38

    Or look for negative cofitness