Top cofit genes for GFF3784 from Variovorax sp. SCN45

ABC transporter, substrate-binding protein RSc1750
SEED: Branched-chain amino acid ABC transporter, amino acid-binding protein (TC 3.A.1.4.1)

Rank Hit Name Description Conserved? Cofitness  
1 GFF3413 Thioredoxin reductase (EC 1.8.1.9) no 0.55
2 GFF6122 ABC-type antimicrobial peptide transport system, permease component no 0.53
3 GFF2657 putative oxidoreductase, nitronate monooxygenase family 0.28 0.52
4 GFF6952 Metallo-beta-lactamase family protein, RNA-specific no 0.52
5 GFF6463 Oxidoreductase, short-chain dehydrogenase/reductase family no 0.52
6 GFF2164 Transcriptional regulator, IclR family no 0.51
7 GFF1060 Hydroxymethylpyrimidine ABC transporter, transmembrane component no 0.50
8 GFF386 Membrane-associated zinc metalloprotease no 0.50
9 GFF5461 2-dehydrotetronate isomerase (EC 5.3.1.35) no 0.50
10 GFF2230 3-oxoadipate CoA-transferase subunit A (EC 2.8.3.6) no 0.50
11 GFF1919 Rhodanese-related sulfurtransferase, 4 domains no 0.50
12 GFF5218 ABC transporter, ATP-binding protein (cluster 3, basic aa/glutamine/opines) no 0.48
13 GFF3353 Branched-chain amino acid ABC transporter, ATP-binding protein LivF (TC 3.A.1.4.1) no 0.48
14 GFF423 Alpha-ribazole-5'-phosphate phosphatase (EC 3.1.3.73) no 0.48
15 GFF7145 Transcriptional regulator, GntR family no 0.47
16 GFF943 Intracellular PHB depolymerase no 0.46
17 GFF11 Two-component transcriptional response regulator, OmpR family no 0.46
18 GFF4452 Two-component transcriptional response regulator, LuxR family no 0.46
19 GFF571 6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.78) no 0.46
20 GFF1671 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) no 0.45

Or look for negative cofitness