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  • Top cofit genes for GFF3777 from Variovorax sp. SCN45

    Prolyl endopeptidase (EC 3.4.21.26)
    SEED: Prolyl endopeptidase (EC 3.4.21.26)
    KEGG: prolyl oligopeptidase

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF2208 Type II/IV secretion system ATP hydrolase TadA/VirB11/CpaF, TadA subfamily 0.23 0.60
    2 GFF6396 hypothetical protein no 0.55
    3 GFF7161 Transcriptional regulator, LysR family no 0.54
    4 GFF4144 Prolyl endopeptidase (EC 3.4.21.26) no 0.54
    5 GFF5920 no description no 0.53
    6 GFF5377 Transcriptional regulator, AcrR family no 0.52
    7 GFF7389 Cyclohexanone monooxygenase (EC 1.14.13.22) no 0.52
    8 GFF92 KEGG: general secretion pathway protein I no 0.50
    9 GFF2492 BUG/TctC family periplasmic protein no 0.50
    10 GFF7262 no description no 0.49
    11 GFF1380 Peptidase M48, Ste24p no 0.49
    12 GFF4607 Putative DNA methylase no 0.48
    13 GFF2468 Outer membrane protein assembly factor YaeT no 0.48
    14 GFF790 hypothetical protein no 0.46
    15 GFF6343 no description no 0.46
    16 GFF2426 ABC transporter, substrate-binding protein (cluster 1, maltose/g3p/polyamine/iron) no 0.46
    17 GFF445 Ferrichrome transport ATP-binding protein FhuC no 0.46
    18 GFF1943 DNA polymerase III alpha subunit (EC 2.7.7.7) no 0.46
    19 GFF7356 Branched-chain amino acid ABC transporter, ATP-binding protein LivF (TC 3.A.1.4.1) no 0.45
    20 GFF2618 no description no 0.45

    Or look for negative cofitness