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  • Top cofit genes for PS417_19335 from Pseudomonas simiae WCS417

    isochorismatase
    SEED: Isochorismatase (EC 3.3.2.1)

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_01710 histidine utilization repressor 0.30 0.38
    2 PS417_22520 histidine kinase 0.31 0.37
    3 PS417_17545 2-oxoisovalerate dehydrogenase 0.53 0.36
    4 PS417_00335 cytochrome B561 0.40 0.35
    5 PS417_21070 aconitate hydratase 0.69 0.34
    6 PS417_22675 histidine kinase 0.88 0.34
    7 PS417_06840 beta-D-glucoside glucohydrolase no 0.33
    8 PS417_21750 acetyl-CoA synthetase 0.76 0.33
    9 PS417_22130 glucose/xylose ABC transporter, ATPase component (from data) 0.92 0.33
    10 PS417_22145 glucose/xylose ABC transporter, periplasmic substrate-binding component (from data) 0.90 0.31
    11 PS417_23725 methylmalonate-semialdehyde dehydrogenase 0.43 0.31
    12 PS417_22140 glucose/xylose ABC transporter, permease component 2 (from data) 0.91 0.31
    13 PS417_22135 glucose/xylose ABC transporter, permease component 1 (from data) 0.89 0.31
    14 PS417_25705 lipoate--protein ligase 0.26 0.31
    15 PS417_00580 acyl-CoA dehydrogenase 0.51 0.30
    16 PS417_17565 branched-chain amino acid aminotransferase 0.79 0.30
    17 PS417_04070 porin no 0.30
    18 PS417_01570 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase 0.73 0.30
    19 PS417_12665 hypothetical protein 0.47 0.30
    20 PS417_27035 FAD-linked oxidase 0.61 0.29

    Or look for negative cofitness