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Cofit
Protein
Homologs
Top cofit genes for PS417_19335 from
Pseudomonas simiae WCS417
isochorismatase
SEED: Isochorismatase (EC 3.3.2.1)
Rank
Hit
Name
Description
Conserved?
Cofitness
1
PS417
_01710
histidine utilization repressor
0.30
0.38
2
PS417
_22520
histidine kinase
0.31
0.37
3
PS417
_17545
2-oxoisovalerate dehydrogenase
0.53
0.36
4
PS417
_00335
cytochrome B561
no
0.35
5
PS417
_21070
aconitate hydratase
0.69
0.34
6
PS417
_22675
histidine kinase
0.88
0.34
7
PS417
_06840
beta-D-glucoside glucohydrolase
no
0.33
8
PS417
_21750
acetyl-CoA synthetase
0.28
0.33
9
PS417
_22130
glucose/xylose ABC transporter, ATPase component
(from data)
0.92
0.33
10
PS417
_22145
glucose/xylose ABC transporter, periplasmic substrate-binding component
(from data)
0.90
0.31
11
PS417
_23725
methylmalonate-semialdehyde dehydrogenase
0.43
0.31
12
PS417
_22140
glucose/xylose ABC transporter, permease component 2
(from data)
0.91
0.31
13
PS417
_22135
glucose/xylose ABC transporter, permease component 1
(from data)
0.89
0.31
14
PS417
_25705
lipoate--protein ligase
0.26
0.31
15
PS417
_00580
acyl-CoA dehydrogenase
0.40
0.30
16
PS417
_17565
branched-chain amino acid aminotransferase
0.68
0.30
17
PS417
_04070
porin
no
0.30
18
PS417
_01570
1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase
0.27
0.30
19
PS417
_12665
hypothetical protein
0.47
0.30
20
PS417
_27035
FAD-linked oxidase
0.52
0.29
Or look for
negative cofitness